| # | Group A | MP | W | D | L | G | GD | Pts | Form |
|---|
| 1. | PSMS Medan | 6 | 5 | 1 | 0 | 11:4 | 7 | 16 | |
| 2. | Sada Sumut | 5 | 4 | 0 | 1 | 6:1 | 5 | 12 | |
| 3. | Sriwijaya | 6 | 3 | 2 | 1 | 7:4 | 3 | 11 | |
| 4. | Semen Padang | 6 | 2 | 3 | 1 | 12:5 | 7 | 9 | |
| 5. | Persiraja Aceh | 6 | 3 | 0 | 3 | 5:10 | -5 | 9 | |
| 6. | PSKC Cimahi | 6 | 2 | 1 | 3 | 4:5 | -1 | 7 | |
| 7. | Perserang Serang | 7 | 2 | 0 | 5 | 3:12 | -9 | 6 | |
| 8. | PSDS Deli Serdang | 6 | 1 | 2 | 3 | 5:7 | -2 | 5 | |
| 9. | PSPS Riau | 6 | 0 | 1 | 5 | 6:11 | -5 | 1 | |
| # | Group B | MP | W | D | L | G | GD | Pts | Form |
|---|
| 1. | Bekasi City | 7 | 5 | 1 | 1 | 10:3 | 7 | 16 | |
| 2. | Persijap Jepara | 7 | 3 | 3 | 1 | 9:7 | 2 | 12 | |
| 3. | Gresik | 7 | 2 | 4 | 1 | 6:3 | 3 | 10 | |
| 4. | PSCS Cilacap | 7 | 2 | 4 | 1 | 6:5 | 1 | 10 | |
| 5. | Persipa Pati | 7 | 2 | 3 | 2 | 9:9 | 0 | 9 | |
| 6. | PSIM Yogyakarta | 7 | 2 | 3 | 2 | 6:8 | -2 | 9 | |
| 7. | Persikab | 7 | 1 | 4 | 2 | 4:6 | -2 | 7 | |
| 8. | Persela Lamongan | 7 | 1 | 3 | 3 | 11:13 | -2 | 6 | |
| 9. | Persekat | 7 | 1 | 3 | 3 | 4:7 | -3 | 6 | |
| 10. | Nusantara | 7 | 1 | 2 | 4 | 2:6 | -4 | 5 | |
| # | Group C | MP | W | D | L | G | GD | Pts | Form |
|---|
| 1. | Persipura Jayapura | 6 | 3 | 2 | 1 | 9:4 | 5 | 11 | |
| 2. | Balikpapan | 6 | 3 | 1 | 2 | 12:7 | 5 | 10 | |
| 3. | Persipal BU | 6 | 2 | 4 | 0 | 4:2 | 2 | 10 | |
| 4. | Deltras Sidoarjo | 6 | 3 | 0 | 3 | 12:7 | 5 | 9 | |
| 5. | Sulut Utd | 5 | 3 | 0 | 2 | 7:5 | 2 | 9 | |
| 6. | Persewar Waropen | 7 | 2 | 3 | 2 | 11:9 | 2 | 9 | |
| 7. | Putra Delta | 6 | 2 | 2 | 2 | 9:10 | -1 | 8 | |
| 8. | PSBS Biak Numfor | 5 | 1 | 1 | 3 | 2:6 | -4 | 4 | |
| 9. | Kalteng Putra | 5 | 0 | 1 | 4 | 1:17 | -16 | 1 | |
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